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Refgenie: next-generation reference genome management
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Refgenie
Refgenie server
Refgenie 1
Refgenie server 1
Refget
Refgenie: next-generation reference genome management
Refgenie
Refgenie
Getting Started
Getting Started
Demo videos
Overview
Install and configure
Basic tutorial
Citing refgenie
How-to guides
How-to guides
Refer to assets
Download pre-built assets
Build assets
Add custom assets
Retrieve paths to assets
Use asset tags
Use aliases
Populate refgenie paths
Compare genomes
Run my own asset server
Use refgenie from Python
Use refgenie in your pipeline
Use refgenie on the cloud
Use refgenie with iGenomes
Upgrade from config 0.3 to 0.4
Reference
Reference
Studies using refgenie
Genome configuration file
Recipe
Asset class
Glossary
Buildable assets
Usage
Python API
Refgenconf usage
FAQ
Support
Contributing
Changelog
Refgenie server
Refgenie server
Refgenie 1
Refgenie 1
Getting Started
Getting Started
Overview
Install
Configure
Citing refgenie
How-to guides
How-to guides
Refer to assets
Download pre-built assets
Use refgenie from Python
Use data channels
Build assets
Download pre-built assets
Retrieve paths to assets
Managing asset groups and naming
Populate refgenie paths
Reference
Reference
Glossary
Studies using refgenie
Recipe
Asset class
Refgenie server 1
Refgenie server 1
Preparing servable assets at scale
Data channels
Remotes
Persisting asset download stats
Refget
Refget
Getting started
Getting started
How-to guides
How-to guides
Introduction
Computing digests
GlobalRefgetStore
Sequences Client
Sequence Collections Client
RefgetDB Agent
Adding a fastAPI router
Compliance testing
Command-line interface
Reference
Reference
Changelog
Refget Python API
Pydantic models
reference genome manager
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