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Demo videos - start working with refgenie

Check out these demonstration videos, which show how to quickly start working with refgenie.

After refgenie Python package is installed with pip install refgenie, refgenie can be used with or without genome configuration file.

Without config - remote mode

If used without genome configuration file, the data does not persist from session to session. It's really useful in cloud applications.

Hint: all of these commands end with "r":

  • refgenie listr
  • refgenie seekr
  • refgenie populater

With config - local mode

If used with genome configuration file, the data persists from session to session. That's the most common scenario, you can build, pull and seek assets managed locally.